| Platinum | Director of the FBC | Unlock all other trophies | 4.2% Ultra Rare | 507 pts |
| Silver | Astral Tactician | Complete 25 Board Countermeasures | 4.9% Ultra Rare | 173 pts |
| Bronze | Volatile Debris | Kill 10 enemies with the Shield Burst Ability | 6.8% Very Rare | 95 pts |
| Gold | Master Parautilitarian | Spend 100 Ability Points | 6.9% Very Rare | 188 pts |
| Silver | Crisis Management | Complete 5 Bureau Alerts | 7.4% Very Rare | 135 pts |
| Bronze | Head of Communications | Defeat Mr. Tomassi | 8.6% Very Rare | 82 pts |
| Silver | FBC Crisis Solution Task Force | Complete 15 Side Missions | 10.4% Rare | 110 pts |
| Bronze | Aggressive Growth | Defeat Mold-1 | 10.5% Rare | 73 pts |
| Bronze | Altered Manifestations May Occur | Defeat esseJ | 11.9% Rare | 68 pts |
| Bronze | Living Archetypes | Defeat the Anchor | 12.9% Rare | 65 pts |
| Bronze | Inter-Departmental Cooperation | Complete 10 Side Missions | 13.2% Rare | 64 pts |
| Bronze | War Games | Complete 5 Board Countermeasures | 14% Rare | 62 pts |
| Bronze | Expert Parautilitarian | Spend 50 Ability Points | 14.7% Rare | 60 pts |
| Silver | Non-Standard Issue | Upgrade any Weapon Form to Level 3 | 16.1% Rare | 85 pts |
| Silver | Interdimensional Defender | Killed 1000 Hiss | 16.4% Rare | 84 pts |
| Gold | Take Control | Complete Mission 10 | 16.5% Rare | 112 pts |
| Silver | Astral Phenomena | Defeat Former | 16.8% Rare | 83 pts |
| Bronze | Polaris | Complete Mission 9 | 17.1% Rare | 55 pts |
| Bronze | Finnish Tango | Complete Mission 8 | 18% Rare | 53 pts |
| Silver | Discerning the Pattern | Cleanse 25 Control Points | 18.3% Rare | 79 pts |
| Bronze | First On the Scene | Complete 1 Bureau Alert | 18.4% Rare | 52 pts |
| Bronze | The Face of the Enemy | Complete Mission 7 | 19.2% Rare | 51 pts |
| Bronze | The Importance of Synergy | Complete 5 Side Missions | 19.7% Rare | 50 pts |
| Silver | Career Development | Unlock all 3 Personal Mod slots | 21.1% Uncommon | 72 pts |
| Bronze | Cognitive Intruder | Compel 10 enemies with the Seize Ability | 21.2% Uncommon | 48 pts |
| Bronze | My Brother's Keeper | Complete Mission 6 | 22.3% Uncommon | 47 pts |
| Gold | Bureau Archivist | Collect 120 Collectibles | 22.4% Uncommon | 93 pts |
| Bronze | Rising Thought | Obtain the Levitate Ability | 22.4% Uncommon | 46 pts |
| Bronze | Psychic Occupation | Obtain the Compel Ability | 22.8% Uncommon | 46 pts |
| Bronze | Insular Telekinesis | Obtain the Shield Ability | 24.1% Uncommon | 44 pts |
| Bronze | Threshold | Complete Mission 5 | 24.8% Uncommon | 44 pts |
| Silver | Paranatural Collection | Collect more than 100,000 Source | 25% Uncommon | 65 pts |
| Bronze | Proper Handling Procedures | Use Launch to throw a grenade or rocket | 26.9% Uncommon | 42 pts |
| Bronze | Old Boys' Club | Complete Mission 4 | 27.5% Uncommon | 41 pts |
| Bronze | Record Keeper | Collect 80 Collectibles | 28.3% Uncommon | 40 pts |
| Bronze | Ritual Intuition | Cleanse 10 Control Points | 29.3% Uncommon | 40 pts |
| Bronze | Unstable Matter | Kill 50 enemies with the Launch Ability | 32.7% Uncommon | 37 pts |
| Bronze | Directorial Override | Complete Mission 3 | 32.9% Uncommon | 37 pts |
| Bronze | Shifting Positions | Obtain the Evade Ability | 36.9% Uncommon | 34 pts |
| Bronze | Ritualistic Thinking | Cleanse 5 Control Points | 38.2% Uncommon | 34 pts |
| Bronze | Astral Construction | Construct a Weapon Form or Mod | 39.9% Uncommon | 33 pts |
| Bronze | Parautilitarian | Unlock 1 Ability Tree Upgrade | 42.4% Common | 32 pts |
| Bronze | Strange Collection | Collect 40 Collectibles | 42.7% Common | 32 pts |
| Bronze | Unknown Caller | Complete Mission 2 | 43.4% Common | 31 pts |
| Bronze | Paranatural Powerhouse | Obtain the Launch Ability | 52.2% Common | 28 pts |
| Bronze | Welcome to the Oldest House | Complete Mission 1 | 62.7% Common | 25 pts |
| Bronze | Choose to be Chosen | Obtain the Service Weapon | 85.2% Common | 21 pts |